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Shut up.
Just kidding. (hey, you asked for it)
Relatively few diseases would pass from rat to reptile, especially with having to live without a host for 3-4 weeks; but I tend to try to err on the safe side, as well. If the same enclosure and supplies will be used, I would clean them with a bleach solution - leaving wet for at least 5-10 minutes (rinse thoroughly afterwards). Beyond that, I've been known to wipe down walls with Chlorhexidine...but that's pretty rare.
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